ZFIN ID: ZDB-GENE-050419-52
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Gene Name: afadin, adherens junction formation factor a
Gene Symbol: afdna
Sequence Ontology ID : SO:0000704

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Previous Names: mllt4, mllt4a (1), si:ch211-278j12.1

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(Including Attributions)
Location: Chr: 20 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have cell adhesion molecule binding activity; predicted to be involved in regulation of protein localization; predicted to localize to the cell-cell adherens junction; orthologous to  ...
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa11340 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
    • sa11351 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa11362 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa37138 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa37139 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa37140 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH afdna HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH afdna VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process signal transduction (more)
    Cellular Component cell-cell junction (more)
    Molecular Function cell adhesion molecule binding (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000159 (1)
  • InterPro:IPR000253 (1)
  • InterPro:IPR001478 (1)
  • InterPro:IPR002710 (1)
  • InterPro:IPR008984 (1)
  • InterPro:IPR028842 (1)
  • InterPro:IPR029071 (1)
  • InterPro:IPR036034 (1)
  • InterPro:IPR037977 (1)
    		•
  • PROSITE:PS50106 (1)
  • PROSITE:PS50200 (1)
  • PROSITE:PS51126 (1)
    		•
  • Pfam:PF00498 (1)
  • Pfam:PF00595 (1)
  • Pfam:PF00788 (1)
  • Pfam:PF01843 (1)
    		•
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA afdna-202 (1) 8628
    Select Tool
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM afdna No data available
    MARKER RELATIONSHIPS
    afdnaContained in: [BAC] CH211-278J12 (1) (order this), DKEY-14A7 (1) (order this), DKEY-286H23 (1) (order this), DKEYP-95D10 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_021468676 (1)
    Select Tool
    Genomic GenBank:AL928920 (1) 195351bp
    Select Tool
    Polypeptide UniProtKB:E7F4R0 (1) 1976aa
    Select Tool
    Sequence Information (all 49)
    OTHER afdna GENE PAGES
  • Alliance (1)
  • Gene:558359 (1)
  • VEGA:OTTDARG00000012561 (1)
  • Ensembl(GRCz11):ENSDARG00000029472 (2)
    • ORTHOLOGY for afdna (Chr: 20)
    CITATIONS (17)