ZFIN ID: ZDB-GENE-050419-52
Gene Name: afadin, adherens junction formation factor a
Gene Symbol: afdna
Sequence Ontology ID : SO:0000704

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Previous Names: mllt4, mllt4a (1), si:ch211-278j12.1

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(Including Attributions)
Location: Chr: 20 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have cell adhesion molecule binding activity; predicted to be involved in regulation of protein localization; predicted to localize to the cell-cell adherens junction; orthologous to  ...
GENE EXPRESSION No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH afdna HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH afdna VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process signal transduction (more)
Cellular Component cell-cell junction (more)
Molecular Function cell adhesion molecule binding (more)
GO Terms (all 6)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000159 (1)
  • InterPro:IPR000253 (1)
  • InterPro:IPR001478 (1)
  • InterPro:IPR002710 (1)
  • InterPro:IPR008984 (1)
  • InterPro:IPR028842 (1)
  • InterPro:IPR029071 (1)
  • InterPro:IPR036034 (1)
  • InterPro:IPR037977 (1)
  • PROSITE:PS50106 (1)
  • PROSITE:PS50200 (1)
  • PROSITE:PS51126 (1)
  • Pfam:PF00498 (1)
  • Pfam:PF00595 (1)
  • Pfam:PF00788 (1)
  • Pfam:PF01843 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA afdna-202 (1) 8628
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM afdna No data available
    MARKER RELATIONSHIPS
    afdnaContained in: [BAC] CH211-278J12 (1) (order this), DKEY-14A7 (1) (order this), DKEY-286H23 (1) (order this), DKEYP-95D10 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_021468676 (1)
    Genomic GenBank:AL928920 (1) 195351bp
    Select Tool
    Polypeptide UniProtKB:E7F4R0 (1) 1976aa
    Sequence Information (all 49)
    OTHER afdna GENE PAGES
  • Alliance (1)
  • Gene:558359 (1)
  • VEGA:OTTDARG00000012561 (1)
  • Ensembl(GRCz11):ENSDARG00000029472 (2)
  • ORTHOLOGY for afdna (Chr: 20)
    CITATIONS (17)