ZFIN ID: ZDB-GENE-050419-198
Gene Name: SMAD family member 6b
Gene Symbol: smad6b
Sequence Ontology ID : SO:0000704

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Previous Name: si:dkey-288j18.1

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(Including Attributions)
Location: Chr: 18 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (13 images) from Thisse et al., 2005 [eu893]
Wild-type Stages, Structures: Segmentation:1-4 somites (10.33h-11.66h) to Hatching:Long-pec (48.0h-60.0h)
  heart rudiment, heart tube, mesoderm, midbrain (all 11) expand
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa10756 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH smad6b HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    aortic valve stenosis Aortic valve disease 2 614823
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of transcription, DNA-templated (more)
    Cellular Component cytoplasm (more)
    Molecular Function DNA binding (more)
    GO Terms (all 9)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001132
  • InterPro:IPR003619
  • InterPro:IPR008984
  • InterPro:IPR013019
  • InterPro:IPR013790
  • InterPro:IPR017855
  • PROSITE:PS51075
  • PROSITE:PS51076
  • Pfam:PF03165
  • Pfam:PF03166
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA smad6b-001 (1) 2113
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM smad6b No data available
    MARKER RELATIONSHIPS
    smad6bContained in: [BAC] DKEY-288J18 (1) (order this)
    smad6bEncodes: [EST] eu893 (1)
    [cDNA] MGC:162749 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001045051 (1) 2572bp
    Genomic GenBank:CR533570 (1) 167352bp
    Select Tool
    Polypeptide UniProtKB:Q1L8Y3 486aa
    Sequence Clusters UniGene:23081 (1)
    Sequence Information (all 13)
    OTHER smad6b GENE PAGES
  • Gene:564395 (1)
  • VEGA:OTTDARG00000013216 (1)
  • Ensembl(GRCz10):ENSDARG00000031763 (1)
  • ORTHOLOGY for smad6b (Chr: 18)
    CITATIONS (19)