ZFIN ID: ZDB-GENE-050419-161
Gene Name: si:ch211-132b12.3
Gene Symbol: si:ch211-132b12.3    Nomenclature History

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 18 Mapping Details/Browsers
Description: Predicted to have gamma-aminobutyric acid:sodium symporter activity and neurotransmitter binding activity. Predicted to localize to the neuron projection and plasma membrane. Orthologous to human SLC6A12 (solute carrier family 6 member 12).
Genome Resources: Alliance (1),  Gene:100002232 (1),  Ensembl(GRCz11):ENSDARG00000068363 (1)

Nomenclature Note: This gene is derived from the zebrafish genome sequencing and annotation project. When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix 'si:' indicates that this gene is represented by annotated genomic sequence from the Sanger Institute.

GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH si:ch211-132b12.3 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH si:ch211-132b12.3 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Cellular Component integral component of membrane (more)
Molecular Function neurotransmitter:sodium symporter activity (more)
GO Terms (all 8)
PROTEIN FAMILIES, DOMAINS AND SITES
Type InterPro ID Name
Family IPR000175 Sodium:neurotransmitter symporter
Homologous_superfamily IPR037272 Sodium:neurotransmitter symporter superfamily
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA si:ch211-132b12.3-201 (1)    Ensembl 2008
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM si:ch211-132b12.3 No data available
MARKER RELATIONSHIPS
si:ch211-132b12.3 Contained in: [BAC] CH211-132B12 (1)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_001082950 (1) 2008 bp
Genomic GenBank:BX664607 (1) 179328 bp
Select Tool
Polypeptide UniProtKB:Q1LVI9 (1) 577 aa
Sequence Information (all 6)
ORTHOLOGY for si:ch211-132b12.3 ( Chr: 18 )
CITATIONS (12)