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ZIRC
ZFIN ID: ZDB-GENE-050419-154
Gene Name: si:ch211-220f12.1
Gene Symbol: si:ch211-220f12.1    Nomenclature History

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 18 Mapping Details/Browsers
Description: Predicted to be involved in transmembrane transport. Predicted to localize to the adherens junction and bicellular tight junction. Orthologous to human FRMD4A (FERM domain containing 4A).
Genome Resources: Alliance (1),  Gene:564713 (1),  Ensembl(GRCz11):ENSDARG00000042249 (2)

Nomenclature Note: This gene is derived from the zebrafish genome sequencing and annotation project. When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix 'si:' indicates that this gene is represented by annotated genomic sequence from the Sanger Institute.

GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa666 Point Mutation Unknown Splice Site ENU
sa7451 Point Mutation Unknown Missense ENU
sa36573 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa43047 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH si:ch211-220f12.1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH si:ch211-220f12.1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process transmembrane transport (more)
    Cellular Component cytoskeleton (more)
    GO Terms (all 5)
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA frmd4a-201 (1)    Ensembl 3012
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM si:ch211-220f12.1 No data available
    MARKER RELATIONSHIPS
    si:ch211-220f12.1 Contained in: [BAC] CH73-31J5 (1) (order this), CH211-220F12 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001128535 (1) 3012 bp
    Genomic RefSeq:NW_018395004 (1) Blast at MegaBLAST
    Polypeptide UniProtKB:A2CGB3 (1) 1003 aa
    Sequence Clusters UniGene:119061 (1)
    Sequence Information (all 40)
    ORTHOLOGY for si:ch211-220f12.1 ( Chr: 18 )
    CITATIONS (12)