ZFIN ID: ZDB-GENE-050417-86
Gene Name: jumonji domain containing 7
Gene Symbol: jmjd7    Nomenclature History

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Previous Name: zgc:110265

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 17 Mapping Details/Browsers
Description: Predicted to have 2-oxoglutarate-dependent dioxygenase activity. Is expressed in alar plate midbrain region; immature eye; mesoderm; and optic tectum. Orthologous to human JMJD7 (jumonji domain containing 7).
Genome Resources: Alliance (1),  Gene:550278 (1),  Ensembl(GRCz11):ENSDARG00000035546 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa13433 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa36341 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-jmjd7 N/A 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH jmjd7 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH jmjd7 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process biological_process (more)
    Cellular Component cellular_component (more)
    Molecular Function 2-oxoglutarate-dependent dioxygenase activity (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    aberrant processed transcript jmjd7-202 (1)    Ensembl 929
    mRNA jmjd7-201 (1)    Ensembl 1234
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM jmjd7 No data available
    MARKER RELATIONSHIPS
    jmjd7 Contained in: [BAC] CH73-132G21 (1), CH73-272K2 (1)
    jmjd7 Encodes: [cDNA] MGC:110265 (1), MGC:192021 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001017615 (1) 1248 nt
    Genomic GenBank:CU467982 (1) 114155 nt
    Select Tool
    Polypeptide UniProtKB:F1R3W9 (1) 311 aa
    Sequence Information (all 22)
    ORTHOLOGY for jmjd7 ( Chr: 17 )
    CITATIONS (20)