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ZIRC
ZFIN ID: ZDB-GENE-050417-8
Gene Name: glycosyltransferase-like domain containing 1
Gene Symbol: gtdc1    Nomenclature History

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Previous Name: zgc:110568

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 9 Mapping Details/Browsers
Description: Involved in central nervous system development. Orthologous to human GTDC1 (glycosyltransferase like domain containing 1).
Genome Resources: Alliance (1),  Gene:550132 (1),  Ensembl(GRCz11):ENSDARG00000020642 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7158892]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la026849Tg Transgenic Insertion Unknown Unknown DNA
sa9220 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa10288 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa34657 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-gtdc1 N/A 1
    DISEASE ASSOCIATED WITH gtdc1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH gtdc1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process central nervous system development (more)
    Cellular Component cellular_component (more)
    GO Terms (all 2)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001296 (1)
  • InterPro:IPR022701 (1)
  • Pfam:PF00534 (1)
  • Pfam:PF12038 (1)
  • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA gtdc1-201 (1)    Ensembl 1560
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM gtdc1 No data available
    MARKER RELATIONSHIPS
    gtdc1 Contained in: [BAC] CH211-69N2 (1) (order this), DKEY-28L22 (1) (order this), DKEY-52O2 (1) (order this)
    gtdc1 Encodes: [EST] IMAGE:7158892 (1) (order this)
    [cDNA] MGC:110568 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001017560 (1) 1512 bp
    Genomic GenBank:CR405716 (1) 202532 bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q568B7 (1) 433 aa
    Sequence Clusters UniGene:162112 (1)
    Sequence Information (all 19)
    ORTHOLOGY for gtdc1 ( Chr: 9 )
    CITATIONS (21)