ZFIN ID: ZDB-GENE-050417-417
Gene Name: glucosamine-6-phosphate deaminase 1
Gene Symbol: gnpda1    Nomenclature History

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Previous Name: zgc:110691

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 14 Mapping Details/Browsers
Description: Predicted to have glucosamine-6-phosphate deaminase activity and identical protein binding activity. Predicted to be involved in UDP-N-acetylglucosamine biosynthetic process and amino sugar catabolic process. Predicted to localize to cytoplasm. Is expressed in gut and intestinal bulb. Orthologous to human GNPDA1 (glucosamine-6-phosphate deaminase 1).
Genome Resources: Alliance (1),  Gene:550565 (1),  Ensembl(GRCz11):ENSDARG00000037307 (1)
GENE EXPRESSION
Directly Submitted Expression Data: 3 figures (4 images) from Thisse et al., 2004 [IMAGE:6904677]
Wild-type Stages, Structures: Pharyngula:High-pec (42.0h-48.0h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa22471 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa38996 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH gnpda1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH gnpda1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process carbohydrate metabolic process (more)
    Cellular Component cytoplasm (more)
    Molecular Function glucosamine-6-phosphate deaminase activity (more)
    GO Terms (all 10)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA gnpda1-201 (1)    Ensembl 1043
    gnpda1-203 (1)    Ensembl 955
    ncRNA gnpda1-003 (1)    Ensembl 753
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM gnpda1 No data available
    MARKER RELATIONSHIPS
    gnpda1 Contained in: [BAC] CH211-119P14 (1)
    gnpda1 Encodes: [EST] IMAGE:6904677 (1)
    [cDNA] MGC:110691 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001017867 (1) 1055 nt
    Genomic GenBank:BX470157 (1) 201228 nt Blast at MegaBLAST
    Polypeptide UniProtKB:E9QB29 (1) 275 aa
    Sequence Information (all 10)
    ORTHOLOGY for gnpda1 ( Chr: 14 )
    CITATIONS (23)