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ZIRC
ZFIN ID: ZDB-GENE-050417-394
Gene Name: transcription factor AP-2 beta
Gene Symbol: tfap2b
Sequence Ontology ID : SO:0000704

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Previous Names: ap2b (1), si:dkey-5e16.1 (1), zgc:110163 (1)

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(Including Attributions)
Location: Chr: 20 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II regulatory region sequence-specific DNA binding activity. Involved in cartilage  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa10090 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH tfap2b HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Char syndrome Char syndrome 169100
    Patent ductus arteriosus 2 617035
    DISEASE ASSOCIATED WITH tfap2b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cartilage development (more)
    Cellular Component nucleus (more)
    Molecular Function DNA-binding transcription factor activity (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR004979 (1)
  • InterPro:IPR008122 (1)
  • InterPro:IPR013854 (1)
  • Pfam:PF03299 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    antisense ottdart00000059603 (1) 4033
    mRNA tfap2b-001 (1) 3081
    tfap2b-002 (1) 822
    tfap2b-003 (1) 770
    ncRNA tfap2b-004 (1) 2436
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM tfap2b No data available
    MARKER RELATIONSHIPS
    tfap2bContained in: [BAC] DKEY-5E16 (order this)
    tfap2bEncodes: [cDNA] MGC:110163 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001024665 (1) 3148bp
    Genomic GenBank:BX005121 (1) 211231bp Blast at MegaBLAST
    Polypeptide UniProtKB:A0A286Y8U3 (1) 439aa
    Sequence Clusters UniGene:83177 (1)
    Sequence Information (all 20)
    ORTHOLOGY for tfap2b (Chr: 20)
    CITATIONS (27)