ZFIN ID: ZDB-GENE-050417-38
Gene Name: ribosomal RNA processing 7 homolog A
Gene Symbol: rrp7a
Sequence Ontology ID : SO:0000704

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Previous Name: zgc:110084

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(Including Attributions)
Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:110084]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa11429 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH rrp7a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH rrp7a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process ribosomal small subunit assembly (more)
    Cellular Component CURI complex (more)
    Molecular Function nucleic acid binding (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000504 (1)
  • InterPro:IPR012677 (1)
  • InterPro:IPR024326 (1)
  • InterPro:IPR034890 (1)
  • InterPro:IPR035979 (1)
  • InterPro:IPR040446 (1)
  • PROSITE:PS50102 (1)
  • Pfam:PF00076 (1)
  • Pfam:PF12923 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA rrp7a-001 (1) 1005
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM rrp7a No data available
    MARKER RELATIONSHIPS
    rrp7aContained in: [Fosmid] CH1073-314I13 (1) (order this)
    rrp7aEncodes: [cDNA] MGC:110084 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001017579 (1) 969bp
    Genomic GenBank:FP245516 (1) 36213bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4IGH7 (1) 280aa
    Sequence Clusters UniGene:81884 (1)
    Sequence Information (all 11)
    OTHER rrp7a GENE PAGES
  • Alliance (1)
  • Gene:550241 (1)
  • VEGA:OTTDARG00000037048 (1)
  • Ensembl(GRCz11):ENSDARG00000098934 (1)
  • ORTHOLOGY for rrp7a (Chr: 3)
    CITATIONS (17)