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ZIRC
ZFIN ID: ZDB-GENE-050417-368
Gene Name: ADP ribosylation factor like GTPase 3a
Gene Symbol: arl3a
Sequence Ontology ID : SO:0001217

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Attributions

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Previous Names: si:dkey-52k1.1, zgc:110197

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(Including Attributions)
Location: Chr: 13 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have GTP binding activity. Human ortholog(s) of this gene implicated in Joubert syndrome and retinitis pigmentosa. Is expressed in neural tube; otic placode; and pronephric duct.  ...
GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (4 images) from Thisse et al., 2004 [MGC:110197]
Wild-type Stages, Structures: Segmentation:14-19 somites (16.0h-19.0h) to Segmentation:14-19 somites (16.0h-19.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH arl3a HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
Joubert syndrome 35 618161
Retinitis pigmentosa 83 618173
DISEASE ASSOCIATED WITH arl3a VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process cilium assembly (more)
Cellular Component cytoplasm (more)
Molecular Function GTP binding (more)
GO Terms (all 5)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR005225 (1)
  • InterPro:IPR006689 (1)
  • InterPro:IPR027417 (1)
  • Pfam:PF00025 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA arl3 (1 of many)-203 (1) 543
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM arl3a No data available
    MARKER RELATIONSHIPS
    arl3a Contained in: [BAC] DKEY-52K1 (1) (order this)
    arl3a Encodes: [cDNA] MGC:110197 (1) (order this), MGC:192612 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001017827 (1) 1040 bp
    Genomic GenBank:CR792443 (1) 217981 bp Blast at MegaBLAST
    Polypeptide UniProtKB:A0A2R8QI61 (1) 182 aa
    Sequence Clusters UniGene:92220 (1)
    Sequence Information (all 20)
    ORTHOLOGY for arl3a ( Chr: 13 )
    CITATIONS (14)