ZFIN ID: ZDB-GENE-050417-368
Gene Name: ADP ribosylation factor like GTPase 3a
Gene Symbol: arl3a    Nomenclature History

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Previous Names: si:dkey-52k1.1, zgc:110197

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 13 Mapping Details/Browsers
Description: Predicted to have GTP binding activity. Predicted to be involved in cilium assembly. Predicted to localize to cytoplasm and microtubule cytoskeleton. Is expressed in neural tube; otic placode; and pronephric duct. Human ortholog(s) of this gene implicated in Joubert syndrome and retinitis pigmentosa. Orthologous to human ARL3 (ADP ribosylation factor like GTPase 3).
Genome Resources: Alliance (1),  Gene:550525 (1),  Ensembl(GRCz11):ENSDARG00000056794 (1)
GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (4 images) from Thisse et al., 2004 [MGC:110197]
Wild-type Stages, Structures: Segmentation:14-19 somites (16.0h-19.0h) to Segmentation:14-19 somites (16.0h-19.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH arl3a HUMAN ORTHOLOG
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Joubert syndrome 35 618161
Retinitis pigmentosa 83 618173
DISEASE ASSOCIATED WITH arl3a VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process cilium assembly (more)
Cellular Component cytoplasm (more)
Molecular Function GTP binding (more)
GO Terms (all 5)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA arl3 (1 of many)-203 (1)    Ensembl 543
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM arl3a No data available
MARKER RELATIONSHIPS
arl3a Contained in: [BAC] DKEY-52K1 (1) (order this)
arl3a Encodes: [cDNA] MGC:110197 (1), MGC:192612 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_001017827 (1) 1040 nt
Genomic GenBank:CR792443 (1) 217981 nt Blast at MegaBLAST
Polypeptide UniProtKB:A0A2R8QI61 (1) 182 aa
Sequence Information (all 19)
ORTHOLOGY for arl3a ( Chr: 13 )
CITATIONS (15)