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General Information
ZIRC
ZFIN ID: ZDB-GENE-050417-341
Gene Name: calpain 2, (m/II) large subunit, like
Gene Symbol: capn2l
Sequence Ontology ID : SO:0000704

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Previous Names: wu:fb09d04, xx:hac23b03, zgc:112420, zgc:92480

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(Including Attributions)
Location: Chr: 22 Mapping Details/Browsers
Nomenclature History
Note:
AUTOMATED DESCRIPTION
Predicted to have calcium ion binding activity and calcium-dependent cysteine-type endopeptidase activity. Predicted to be involved in proteolysis and regulation of cytoskeleton organization.  ...
GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (13 images) from Thisse et al., 2004 [MGC:92480]
Wild-type Stages, Structures: Segmentation:14-19 somites (16.0h-19.0h) to Hatching:Long-pec (48.0h-60.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa12826 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH capn2l HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH capn2l VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process proteolysis (more)
    Cellular Component cytoplasm (more)
    Molecular Function calcium-dependent cysteine-type endopeptidase activity (more)
    GO Terms (all 8)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA capn2l-202 (1) 2613
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM capn2l No data available
    MARKER RELATIONSHIPS
    capn2lContained in: [BAC] CH73-80N6 (1) (order this)
    capn2lEncodes: [EST] fb09d04, fb26a06 (1), hac23b03
    [cDNA] MGC:92480 (1) (order this), MGC:112420 (1) (order this), MGC:174371 (1) (order this), MGC:174666 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001003485 (1) 2625bp
    Genomic GenBank:CT954258 (1) 94799bp
    Select Tool
    Polypeptide UniProtKB:F6NUF6 (1) 711aa
    Sequence Clusters UniGene:1945 (1)
    Sequence Information (all 29)
    ORTHOLOGY for capn2l (Chr: 22)
    CITATIONS (23)