ZFIN ID: ZDB-GENE-050417-305
Gene Name: Rho GTPase activating protein 1
Gene Symbol: arhgap1    Nomenclature History

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Previous Names: fk03b12, fk61c06, wu:cegs2891, wu:fk03b12, wu:fk61c06, zgc:110361

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 7 Mapping Details/Browsers
Description: Predicted to be involved in signal transduction. Is expressed in female organism; musculature system; nervous system; and somite. Orthologous to human ARHGAP1 (Rho GTPase activating protein 1).
Genome Resources: Alliance (1),  Gene:550478 (1),  Ensembl(GRCz11):ENSDARG00000024324 (2)
GENE EXPRESSION
All Expression Data: 10 figures from 3 publications
Directly Submitted Expression Data: 7 figures (10 images) from Thisse et al., 2004 [MGC:110361]
  2 figures (4 images) from Rauch et al., 2003 [cegs2891]
Wild-type Stages, Structures: Segmentation:14-19 somites (16.0h-19.0h) to Adult (90d-730d, breeding adult)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
a232 Complex Unknown Unknown CRISPR
sa38631 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    CRISPR1-arhgap1 1
    CRISPR2-arhgap1 1
    CRISPR3-arhgap1 1
    CRISPR4-arhgap1 1
    DISEASE ASSOCIATED WITH arhgap1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH arhgap1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process signal transduction (more)
    GO Terms (all 1)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA arhgap1-201 (1)    Ensembl 3653
    ncRNA arhgap1-002 (1)    Ensembl 440
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM arhgap1 No data available
    MARKER RELATIONSHIPS
    arhgap1 Contained in: [BAC] DKEY-23N7 (1) (order this)
    arhgap1 Encodes: [EST] cegs2891 (1) (order this), fk03b12, fk61c06, fr86c05
    [cDNA] MGC:110361 (1), MGC:191702 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001017781 (1) 1500 nt
    Genomic GenBank:BX957256 (1) 227909 nt Blast at MegaBLAST
    Polypeptide UniProtKB:F1R2J2 (1) 434 aa
    Sequence Information (all 20)
    ORTHOLOGY for arhgap1 ( Chr: 7 )
    CITATIONS (23)