ZFIN ID: ZDB-GENE-050417-248
Gene Name: solute carrier family 27 member 4
Gene Symbol: slc27a4
Sequence Ontology ID : SO:0000704

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Previous Names: sb:eu977, zgc:112138

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(Including Attributions)
Location: Chr: 10 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have long-chain fatty acid transporter activity and long-chain fatty acid-CoA ligase activity; predicted to be involved in fatty acid transport, response to nutrient, and very long-chain  ...
GENE EXPRESSION
Directly Submitted Expression Data: 7 figures (3 images) from Thisse et al., 2005 [eu977]
Wild-type Stages, Structures: Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa13961 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa21677 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa41599 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH slc27a4 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Ichthyosis prematurity syndrome 608649
    DISEASE ASSOCIATED WITH slc27a4 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process fatty acid transport (more)
    Cellular Component integral component of membrane (more)
    Molecular Function catalytic activity (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000873 (1)
  • InterPro:IPR020845 (1)
  • InterPro:IPR022272 (1)
  • InterPro:IPR025110 (1)
  • InterPro:IPR030304 (1)
  • PROSITE:PS00213 (1)
  • PROSITE:PS00455 (1)
  • Pfam:PF00501 (1)
  • Pfam:PF13193 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA slc27a4-201 (1) 2460
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM slc27a4 No data available
    MARKER RELATIONSHIPS
    slc27a4Contained in: [BAC] CH211-264F7 (1) (order this), DKEY-21P9 (1) (order this)
    slc27a4Encodes: [EST] eu977 (1)
    [cDNA] MGC:112138 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001017737 (1) 2460bp
    Genomic GenBank:BX005370 (1) 208765bp Blast at MegaBLAST
    Polypeptide UniProtKB:A0A0R4IRL6 (1) 643aa
    Sequence Clusters UniGene:132883 (1)
    Sequence Information (all 14)
    OTHER slc27a4 GENE PAGES
  • Alliance (1)
  • Gene:550432 (1)
  • VEGA:OTTDARG00000022091 (1)
  • ORTHOLOGY for slc27a4 (Chr: 10)
    CITATIONS (18)