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ZIRC
ZFIN ID: ZDB-GENE-050417-248
Gene Name: solute carrier family 27 member 4
Gene Symbol: slc27a4    Nomenclature History

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Previous Names: sb:eu977, zgc:112138

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 10 Mapping Details/Browsers
Description: Predicted to have long-chain fatty acid transporter activity and long-chain fatty acid-CoA ligase activity. Predicted to be involved in fatty acid transport; response to nutrient; and very long-chain fatty acid catabolic process. Predicted to localize to the endoplasmic reticulum membrane; microvillus; and plasma membrane. Is expressed in intestinal bulb. Orthologous to human SLC27A4 (solute carrier family 27 member 4).
Genome Resources: Alliance (1),  Gene:550432 (1),  Ensembl(GRCz11):ENSDARG00000017047 (1)
GENE EXPRESSION
Directly Submitted Expression Data: 7 figures (3 images) from Thisse et al., 2005 [eu977]
Wild-type Stages, Structures: Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa13961 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa21677 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa41599 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    CRISPR1-slc27a4
    2
    MO1-slc27a4 N/A 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH slc27a4 HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    Ichthyosis prematurity syndrome 608649
    DISEASE ASSOCIATED WITH slc27a4 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process fatty acid transport (more)
    Cellular Component integral component of membrane (more)
    Molecular Function catalytic activity (more)
    GO Terms (all 13)
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA slc27a4-201 (1)    Ensembl 2460
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM slc27a4 No data available
    MARKER RELATIONSHIPS
    slc27a4 Contained in: [BAC] CH211-264F7 (1) (order this), DKEY-21P9 (1) (order this)
    slc27a4 Encodes: [EST] eu977 (1)
    [cDNA] MGC:112138 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001017737 (1) 2460 bp
    Genomic GenBank:BX005370 (1) 208765 bp Blast at MegaBLAST
    Polypeptide UniProtKB:A0A0R4IRL6 (1) 643 aa
    Sequence Clusters UniGene:132883 (1)
    Sequence Information (all 14)
    ORTHOLOGY for slc27a4 ( Chr: 10 )
    CITATIONS (23)