Gene

lhx9

ID

ZDB-GENE-050417-210

Name

LIM homeobox 9

Symbol

lhx9 Nomenclature History

Previous Names

si:dkey-121a9.2
zgc:112196

Type

protein_coding_gene

Location

Chr: 22 Mapping Details/Browsers

Description

Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Acts upstream of or within neuron fate specification and thalamus development. Predicted to be active in nucleus. Is expressed in several structures, including brain; forebrain neural keel; hypocretin-secreting neurons; pericardial region; and retina. Orthologous to human LHX9 (LIM homeobox 9).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

16 figures from 12 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: 2 figures from 2 publications
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With lhx9 Human Ortholog

No data available

Associated With lhx9 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Conserved_site	IPR017970	Homeobox, conserved site
Domain	IPR001356	Homeobox domain
Domain	IPR001781	Zinc finger, LIM-type
Homologous_superfamily	IPR009057	Homeobox-like domain superfamily