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General Information
ZIRC
ZFIN ID: ZDB-GENE-050417-171
Gene Name: sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D, like
Gene Symbol: sema6dl
Sequence Ontology ID : SO:0000704

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Previous Names: si:ch211-278n20.1, zgc:112012 (1)

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(Including Attributions)
Location: Chr: 18 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have chemorepellent activity; neuropilin binding activity; and semaphorin receptor binding activity. Predicted to be involved in several processes, including negative regulation of axon  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa8429 Point Mutation Unknown Missense, Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa43158 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa45647 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH sema6dl HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH sema6dl VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process negative chemotaxis (more)
    Cellular Component integral component of membrane (more)
    Molecular Function chemorepellent activity (more)
    GO Terms (all 11)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA sema6dl-203 (1) 3000
    sema6dl-204 (1) 3057
    sema6dl-205 (1) 540
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM sema6dl No data available
    MARKER RELATIONSHIPS
    sema6dlContained in: [BAC] CH211-278N20 (1) (order this)
    sema6dlEncodes: [cDNA] cssl:d408 (1), cssl:d410 (1), MGC:112012 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001017682 (1) 3157bp
    Genomic GenBank:BX323575 (1) 151144bp
    Select Tool
    Polypeptide UniProtKB:A3KPS3 (1) 1018aa
    Sequence Clusters UniGene:124085 (1)
    Sequence Information (all 40)
    ORTHOLOGY for sema6dl (Chr: 18)
    CITATIONS (21)