ZFIN ID: ZDB-GENE-050417-120
Gene Name: zgc:110224
Gene Symbol: zgc:110224    Nomenclature History

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 21 Mapping Details/Browsers
Description: Predicted to have damaged DNA binding activity. Predicted to be involved in base-excision repair. Predicted to localize to nucleus.
Genome Resources: Alliance (1),  Gene:550335 (1),  Ensembl(GRCz11):ENSDARG00000032263 (2)

Nomenclature Note: This gene is characterized by full length cDNAs isolated as part of the Zebrafish Gene Collection (ZGC). When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix `zgc:' indicates that this gene is represented by cDNAs generated by the ZGC project.

GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7166225]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa37346 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH zgc:110224 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH zgc:110224 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process single strand break repair (more)
    Cellular Component nucleus (more)
    Molecular Function damaged DNA binding (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA zgc:110224-201 (1)    Ensembl 2075
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM zgc:110224 No data available
    MARKER RELATIONSHIPS
    zgc:110224 Contained in: [BAC] DKEY-22F5 (1) (order this)
    zgc:110224 Encodes: [EST] IMAGE:7166225 (1)
    [cDNA] MGC:110224 (1), MGC:191672 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001017642 (1) 2091 nt
    Genomic GenBank:BX511168 (1) 263757 nt Blast at MegaBLAST
    Polypeptide UniProtKB:F1QU43 (1) 403 aa
    Sequence Information (all 14)
    ORTHOLOGY for zgc:110224 ( Chr: 21 )
    CITATIONS (16)