header logo image header logo text
Downloads Login
Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-050411-25
Your Input Welcome
We welcome your input and comments. Please use this form to recommend updates to the information in ZFIN. We appreciate as much detail as possible and references as appropriate. We will review your comments promptly.
Please check the highlighted fields and try again.
Thank you for submitting comments. Your input has been emailed to ZFIN curators who may contact you if additional information is required.
Oops. Something went wrong. Please try again later.
Gene Name: NHS-like 1a
Gene Symbol: nhsl1a    Nomenclature History

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Name: im:7139028 (1)

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 17 Mapping Details/Browsers
Description: Predicted to be involved in motor neuron migration. Predicted to localize to the membrane. Is expressed in nervous system and solid lens vesicle. Orthologous to human NHSL1 (NHS like 1).
Genome Resources: Alliance (1), Gene:566695 (1), Ensembl(GRCz11):ENSDARG00000054537 (2)
GENE EXPRESSION
All Expression Data: 7 figures from 3 publications
Directly Submitted Expression Data: 5 figures (8 images) from Thisse et al., 2004 [IMAGE:7139028]
Wild-type Stages, Structures: Segmentation:10-13 somites (14.0h-16.0h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa803 Point Mutation Unknown Premature Stop ENU
sa28880 Point Mutation Unknown Splice Site ENU
sa28881 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa32160 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa36448 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH nhsl1a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH nhsl1a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cell differentiation (more)
    Cellular Component membrane (more)
    Molecular Function molecular_function (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR024845 (1)
    		•
  • Pfam:PF15273 (1)
    		•
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA nhsl1a-201 (1)    Ensembl 6727
    Select Tool
    nhsl1a-202 (1)    Ensembl 705
    Select Tool
    nhsl1a-204 (1)    Ensembl 528
    Select Tool
    ncRNA nhsl1a-004 (1)    Ensembl 671
    Select Tool
    Browsers: NCBI, Ensembl, ZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM nhsl1aNo data available
    MARKER RELATIONSHIPS
    nhsl1aContained in: [BAC] DKEY-190L8 (1) (order this)
    nhsl1aEncodes: [EST] IMAGE:7139028 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_005158819 (1) 6562bp
    Select Tool
    Genomic GenBank:CR407588 (1) 140731bp
    Select Tool
    Polypeptide UniProtKB:A0A2R8QFD4 (1) 1579aa
    Select Tool
    Sequence Information (all 42)
    ORTHOLOGY for nhsl1a (Chr: 17)
    CITATIONS (16)