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ZIRC
ZFIN ID: ZDB-GENE-050411-12
Gene Name: canopy FGF signaling regulator 3
Gene Symbol: cnpy3    Nomenclature History

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Previous Names: canopy3 (1), cnpy3 (1), im:6892510, tnrc5

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 1 Mapping Details/Browsers
Description: Predicted to have signaling receptor binding activity. Predicted to be involved in innate immune response. Predicted to localize to the endoplasmic reticulum. Human ortholog(s) of this gene implicated in early infantile epileptic encephalopathy 60. Orthologous to human CNPY3 (canopy FGF signaling regulator 3).
Genome Resources: Alliance (1),  Gene:550136 (1),  Ensembl(GRCz11):ENSDARG00000070512 (1)
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:6892510]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa32602 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • zko223a Small Deletion Unknown Unknown CRISPR
  • China Zebrafish Resource Center (CZRC) (order this)
  • zko223b Indel Unknown Unknown CRISPR
  • China Zebrafish Resource Center (CZRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    CRISPR1-cnpy3 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH cnpy3 HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    early infantile epileptic encephalopathy 60 Alliance Epileptic encephalopathy, early infantile, 60 617929
    DISEASE ASSOCIATED WITH cnpy3 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process immune system process (more)
    Cellular Component endoplasmic reticulum (more)
    Molecular Function signaling receptor binding (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR021852 (1)
  • Pfam:PF11938 (1)
  • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA cnpy3-201 (1)    Ensembl 1659
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM cnpy3 No data available
    MARKER RELATIONSHIPS
    cnpy3 Contained in: [BAC] CH211-243G6 (1) (order this)
    cnpy3 Encodes: [EST] IMAGE:6892510 (1) (order this)
    [cDNA] MGC:162438 (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001039805 (1) 1633 bp
    Genomic GenBank:AL935188 (1) 160946 bp
    Select Tool
    Polypeptide UniProtKB:A3KNS2 (1) 276 aa
    Sequence Clusters UniGene:151531 (1)
    Sequence Information (all 16)
    ORTHOLOGY for cnpy3 ( Chr: 1 )
    CITATIONS (18)