Gene
rbm39b
- ID
- ZDB-GENE-050327-97
- Name
- RNA binding motif protein 39b
- Symbol
- rbm39b Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 8 Mapping Details/Browsers
- Description
- Predicted to have RNA binding activity. Predicted to be involved in mRNA processing. Predicted to localize to nucleus. Orthologous to human RBM39 (RNA binding motif protein 39).
- Genome Resources
- Note
- None
- Comparative Information
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Type | InterPro ID | Name |
---|---|---|
Domain | IPR000504 | RNA recognition motif domain |
Domain | IPR029123 | Splicing factor RBM39, linker |
Family | IPR006509 | Splicing factor, RBM39-like |
Homologous_superfamily | IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
Homologous_superfamily | IPR035979 | RNA-binding domain superfamily |
Domain Details Per Protein
Protein | Length | Nucleotide-binding alpha-beta plait domain superfamily | RNA-binding domain superfamily | RNA recognition motif domain | Splicing factor, RBM39-like | Splicing factor RBM39, linker |
---|---|---|---|---|---|---|
UniProtKB:Q58ER0
|
539 | |||||
UniProtKB:A0A8M9QDQ9
|
312 | |||||
UniProtKB:A0A8M2BF87
|
440 |
Type | Name | Annotation Method | Length (nt) | Analysis |
---|---|---|---|---|
mRNA |
rbm39b-201
(1)
|
Havana | 2628 nt | |
mRNA |
rbm39b-202
(1)
|
Havana | 941 nt | |
mRNA |
rbm39b-205
(1)
|
Havana | 962 nt | |
mRNA |
rbm39b-207
(1)
|
Ensembl | 5888 nt | |
mRNA |
rbm39b-208
(1)
|
Ensembl | 6216 nt | |
ncRNA |
rbm39b-004
(1)
|
Havana | 928 nt | |
ncRNA |
rbm39b-005
(1)
|
Havana | 839 nt | |
ncRNA |
rbm39b-006
(1)
|
Havana | 772 nt |
Interactions and Pathways
No data available
Plasmids
No data available