ZFIN ID: ZDB-GENE-050327-90
Gene Name: zgc:113343
Gene Symbol: zgc:113343    Nomenclature History

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Gene Type: protein_coding_gene
Location: Chr: 21 Mapping Details/Browsers
Description: Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to localize to nucleus. Orthologous to human ZNF572 (zinc finger protein 572) and ZNF625 (zinc finger protein 625).
Genome Resources: Alliance (1),  Gene:541549 (1),  Ensembl(GRCz11):ENSDARG00000103196 (1)

Nomenclature Note: This gene is characterized by full length cDNAs isolated as part of the Zebrafish Gene Collection (ZGC). When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix `zgc:' indicates that this gene is represented by cDNAs generated by the ZGC project.

GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:113343]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
PHENOTYPE No data available
DISEASE ASSOCIATED WITH zgc:113343 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH zgc:113343 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process regulation of transcription by RNA polymerase II (more)
Cellular Component nucleus (more)
Molecular Function metal ion binding (more)
GO Terms (all 7)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA zgc:113343-201 (1)    Ensembl 679
zgc:113343-202 (1)    Ensembl 778
zgc:113343-203 (1)    Ensembl 1634
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM zgc:113343 No data available
MARKER RELATIONSHIPS
zgc:113343 Contained in: [BAC] DKEY-50I6 (1) (order this)
zgc:113343 Encodes: [cDNA] MGC:113343 (1), MGC:191349 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_001014362 (1) 1625 nt
Genomic GenBank:BX510922 (1) 87532 nt
Select Tool
Polypeptide UniProtKB:Q58EF6 (1) 356 aa
Sequence Information (all 15)
ORTHOLOGY for zgc:113343 ( Chr: 21 )
CITATIONS (19)