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ZIRC
ZFIN ID: ZDB-GENE-050327-77
Gene Name: zgc:110540
Gene Symbol: zgc:110540
Sequence Ontology ID : SO:0000704

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Attributions

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Previous Names: DCK2 (1), wu:fe11h12 (1), wu:fj05e11 (1), zgc:109951

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(Including Attributions)
Location: Chr: 21 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have deoxynucleoside kinase activity. Predicted to be involved in nucleobase-containing compound metabolic process and phosphorylation. Predicted to localize to the cytoplasm.

Nomenclature Note: This gene is characterized by full length cDNAs isolated as part of the Zebrafish Gene Collection (ZGC). When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix `zgc:' indicates that this gene is represented by cDNAs generated by the ZGC project.

GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (14 images) from Thisse et al., 2004 [MGC:109951]
Wild-type Stages, Structures: Gastrula:50%-epiboly (5.25h-5.66h) to Hatching:Long-pec (48.0h-60.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la021922Tg Transgenic Insertion Unknown Unknown DNA
sa14961 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH zgc:110540 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH zgc:110540 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process nucleobase-containing compound metabolic process (more)
    Cellular Component cytoplasm (more)
    Molecular Function ATP binding (more)
    GO Terms (all 11)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR002624 (1)
  • InterPro:IPR027417 (1)
  • InterPro:IPR031314 (1)
  • Pfam:PF01712 (1)
  • EC:2.7.1.74 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA zgc:110540-201 (1) 1584
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM zgc:110540 No data available
    MARKER RELATIONSHIPS
    zgc:110540Contained in: [BAC] CH211-123O7 (1) (order this)
    zgc:110540Contains: [SNP] rs3729119 (1), rs3729120 (1)
    zgc:110540Encodes: [EST] fe11h12, fj05e11 (1)
    [cDNA] MGC:109951 (1) (order this), MGC:110540 (1) (order this), MGC:174279 (1) (order this), MGC:192604 (1) (order this), MGC:198068 (1) (order this), MGC:198070 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001014352 (1) 1574bp
    Genomic GenBank:CR354383 (1) 168569bp
    Select Tool
    Polypeptide UniProtKB:Q58EI2 (1) 264aa
    Sequence Clusters UniGene:78188 (1)
    Sequence Information (all 36)
    ORTHOLOGY for zgc:110540 (Chr: 21)
    CITATIONS (26)