ZFIN ID: ZDB-GENE-050327-58
Gene Name: RUN and FYVE domain containing 3
Gene Symbol: rufy3    Nomenclature History

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Previous Names: im:7148884, wu:fj64d11, zgc:110543

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 5 Mapping Details/Browsers
Description: Predicted to be involved in regulation of axonogenesis. Predicted to localize to cytoplasm. Is expressed in nervous system and trigeminal placode. Orthologous to human RUFY3 (RUN and FYVE domain containing 3).
Genome Resources: Alliance (1),  Gene:541522 (1),  Ensembl(GRCz11):ENSDARG00000029692 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 5 figures (9 images) from Thisse et al., 2004 [IMAGE:7148884]
Wild-type Stages, Structures: Segmentation:14-19 somites (16.0h-19.0h) to Hatching:Long-pec (48.0h-60.0h)
 
High Throughput Expression: Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa40532 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa45222 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH rufy3 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH rufy3 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of axonogenesis (more)
    Cellular Component cytoplasm (more)
    GO Terms (all 2)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS No data available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM rufy3 No data available
    MARKER RELATIONSHIPS
    rufy3 Contained in: [BAC] DKEY-210G19 (order this)
    rufy3 Encodes: [EST] fj64d11, IMAGE:7148884 (1)
    [cDNA] MGC:110543 (1), MGC:158578 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001014335 (1) 1835 nt
    Genomic GenBank:BX323596 (1) 251428 nt Blast at MegaBLAST
    Polypeptide UniProtKB:A1L213 (1) 470 aa
    Sequence Information (all 31)
    ORTHOLOGY for rufy3 ( Chr: 5 )
    CITATIONS (18)