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ZIRC
ZFIN ID: ZDB-GENE-050320-59
Gene Name: zinc finger, SWIM-type containing 8
Gene Symbol: zswim8
Sequence Ontology ID : SO:0000704

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Previous Names: wu:fc49c05, wu:fi39c11, zgc:113421

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(Including Attributions)
Location: Chr: 13 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have zinc ion binding activity; predicted to be involved in regulation of axon guidance; predicted to localize to the Cul2-RING ubiquitin ligase complex; orthologous to human ZSWIM8  ...
GENE EXPRESSION
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la010778Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la027403Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa7226 Point Mutation Unknown Splice Site ENU
    sa11173 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa13957 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa22278 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa28097 Point Mutation Unknown Premature Stop ENU
    sa31922 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH zswim8 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH zswim8 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of axon guidance (more)
    Cellular Component Cul2-RING ubiquitin ligase complex (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR007527 (1)
  • PROSITE:PS50966 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA zswim8-002 (1) 1928
    mRNA zswim8-201 (1) 7250
    zswim8-203 (1) 588
    zswim8-204 (1) 620
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM zswim8 No data available
    MARKER RELATIONSHIPS
    zswim8Contained in: [BAC] CH211-51A6 (1) (order this)
    zswim8Contains: [SNP] rs3728543 (1)
    zswim8Encodes: [EST] fc49c05, fi39c11
    [cDNA] MGC:113421 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001145707 (1)
    Genomic RefSeq:NW_018394882 (1) Blast at MegaBLAST
    Polypeptide UniProtKB:A0A2R8RLR1 (1) 1949aa
    Sequence Clusters UniGene:158992 (1)
    Sequence Information (all 32)
    ORTHOLOGY for zswim8 (Chr: 13)
    CITATIONS (20)