header logo image header logo text
Downloads Login
Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-050320-52
Gene Name: zgc:113531
Gene Symbol: zgc:113531
Sequence Ontology ID : SO:0001217

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Name: im:7142574

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 2 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to be involved in negative regulation of BMP signaling pathway. Predicted to localize to the AMPA glutamate receptor complex and extracellular space. Is expressed in neural tube and spinal  ...

Nomenclature Note: This gene is characterized by full length cDNAs isolated as part of the Zebrafish Gene Collection (ZGC). When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix `zgc:' indicates that this gene is represented by cDNAs generated by the ZGC project.

GENE EXPRESSION
Directly Submitted Expression Data: 5 figures (8 images) from Thisse et al., 2004 [IMAGE:7142574]
Wild-type Stages, Structures: Segmentation:14-19 somites (16.0h-19.0h) to Hatching:Long-pec (48.0h-60.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa18616 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH zgc:113531 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH zgc:113531 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process negative regulation of BMP signaling pathway (more)
    Cellular Component AMPA glutamate receptor complex (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001007 (1)
  • PROSITE:PS01208 (1)
  • PROSITE:PS50184 (1)
  • Pfam:PF00093 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA zgc:113531-201 (1) 1117
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM zgc:113531 No data available
    MARKER RELATIONSHIPS
    zgc:113531 Contained in: [BAC] CH211-261P7 (1) (order this)
    zgc:113531 Encodes: [EST] IMAGE:7142574 (1) (order this)
    [cDNA] MGC:113531 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001013486 (1) 1145 bp
    Genomic GenBank:BX537271 (1) 169504 bp
    Select Tool
    Polypeptide UniProtKB:A8WHY5 (1) 220 aa
    Sequence Clusters UniGene:151979 (1)
    Sequence Information (all 11)
    ORTHOLOGY for zgc:113531 ( Chr: 2 )
    CITATIONS (13)