ZFIN ID: ZDB-GENE-050320-15
Gene Name: zgc:114188
Gene Symbol: zgc:114188
Sequence Ontology ID : SO:0000704

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(Including Attributions)
Location: Chr: 25 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to be a structural constituent of ribosome; predicted to be involved in translation; predicted to localize to the ribosome; orthologous to human RPS17 (ribosomal protein S17).

Nomenclature Note: This gene is characterized by full length cDNAs isolated as part of the Zebrafish Gene Collection (ZGC). When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix `zgc:' indicates that this gene is represented by cDNAs generated by the ZGC project.

GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:114188]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH zgc:114188 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH zgc:114188 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process translation (more)
Cellular Component ribosome (more)
Molecular Function structural constituent of ribosome (more)
GO Terms (all 5)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001210 (1)
  • InterPro:IPR018273 (1)
  • InterPro:IPR036401 (1)
  • PROSITE:PS00712 (1)
  • Pfam:PF00833 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA zgc:114188-001 (1) 737
    ncRNA zgc:114188-002 (1) 734
    zgc:114188-003 (1) 369
    mRNA zgc:114188-004 (1) 723
    zgc:114188-005 (1) 551
    zgc:114188-006 (1) 529
    zgc:114188-007 (1) 311
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM zgc:114188 No data available
    MARKER RELATIONSHIPS
    zgc:114188Contained in: [Fosmid] ZFOS-332C3 (1)
    zgc:114188Encodes: [cDNA] MGC:114188 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001013455 (1) 490bp
    Genomic GenBank:FP236318 (1) 35276bp
    Select Tool
    Polypeptide UniProtKB:Q5BJA1 (1) 134aa
    Sequence Clusters UniGene:31754 (1)
    Sequence Information (all 11)
    OTHER zgc:114188 GENE PAGES
  • Alliance (1)
  • Gene:541327 (1)
  • VEGA:OTTDARG00000039169 (1)
  • ORTHOLOGY for zgc:114188 (Chr: 25)
    CITATIONS (15)