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General Information
ZIRC
ZFIN ID: ZDB-GENE-050320-126
Gene Name: SET and MYND domain containing 2a
Gene Symbol: smyd2a
Sequence Ontology ID : SO:0001217

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Previous Names: smyd2, im:7146196, wu:fc02f02, zgc:110553

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(Including Attributions)
Location: Chr: 17 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have RNA polymerase II complex binding activity and histone methyltransferase activity (H3-K36 specific). Involved in several processes, including animal organ development; caudal fin  ...
GENE EXPRESSION
All Expression Data: 6 figures from 4 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7146196]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa1004 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa10184 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa11935 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH smyd2a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH smyd2a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process heart contraction (more)
    Cellular Component cytosol (more)
    Molecular Function histone methyltransferase activity (H3-K36 specific) (more)
    GO Terms (all 22)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA smyd2a-002 (1) 578
    smyd2a-003 (1) 462
    smyd2a-004 (1) 551
    smyd2a-005 (1) 811
    mRNA smyd2a-201 (1) 2197
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM smyd2a No data available
    MARKER RELATIONSHIPS
    smyd2a Contained in: [BAC] CH211-152H14 (1) (order this)
    smyd2a Encodes: [EST] fc02f02, IMAGE:7142251 (1) (order this), IMAGE:7146196 (1) (order this)
    [cDNA] MGC:110553 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001013550 (1) 2057 bp
    Genomic GenBank:BX936381 (1) 156270 bp
    Select Tool
    Polypeptide UniProtKB:F1QAG3 (1) 435 aa
    Sequence Clusters UniGene:77838 (1)
    Sequence Information (all 18)
    ORTHOLOGY for smyd2a ( Chr: 17 )
    CITATIONS (27)