Gene

rbm6

ID

ZDB-GENE-050309-79

Name

RNA binding motif protein 6

Symbol

rbm6 Nomenclature History

Previous Names

im:7148648
si:ch211-207d10.1

Type

protein_coding_gene

Location

Chr: 6 Mapping Details/Browsers

Description

Predicted to have RNA binding activity and metal ion binding activity.

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

IMAGE:7148648 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With rbm6 Human Ortholog

No data available

Associated With rbm6 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR000504	RNA recognition motif domain
Domain	IPR013087	Zinc finger C2H2-type
Domain	IPR041591	OCRE domain
Homologous_superfamily	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily
Homologous_superfamily	IPR035979	RNA-binding domain superfamily

Domain Details Per Protein

Protein	Length	Nucleotide-binding alpha-beta plait domain superfamily	OCRE domain	RNA-binding domain superfamily	RNA recognition motif domain	Zinc finger C2H2-type
UniProtKB:A0A8M2BDH1 InterPro	1393
UniProtKB:A0A8M2BDM2 InterPro	701

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	rbm6-201 (1) Ensembl	Havana	4748 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	rbm6-002 (1) Ensembl	Havana	739 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance

Citations