ZFIN ID: ZDB-GENE-050309-289
Gene Name: SET domain containing 1B, a
Gene Symbol: setd1ba
Sequence Ontology ID : SO:0000704

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: im:7156157, si:dkey-237o15.4

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 10 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 4 figures from 3 publications
Directly Submitted Expression Data: 2 figures (3 images) from Thisse et al., 2004 [IMAGE:7156157]
Wild-type Stages, Structures: Hatching:Long-pec (48.0h-60.0h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa714 Point Mutation Unknown Premature Stop ENU
sa12989 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa13004 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • European Zebrafish Resource Center (EZRC) (order this)
  • sa34982 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH setd1ba HUMAN ORTHOLOG No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process hematopoietic progenitor cell differentiation (more)
    Cellular Component Set1C/COMPASS complex (more)
    Molecular Function RNA binding (more)
    GO Terms (all 15)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000504 (1)
  • InterPro:IPR001214 (1)
  • InterPro:IPR003616 (1)
  • InterPro:IPR012677 (1)
  • InterPro:IPR024657 (1)
  • InterPro:IPR034468 (1)
  • InterPro:IPR035979 (1)
  • InterPro:IPR037842 (1)
  • PROSITE:PS50102 (1)
  • PROSITE:PS50280 (1)
  • PROSITE:PS50868 (1)
  • Pfam:PF00076 (1)
  • Pfam:PF00856 (1)
  • Pfam:PF11764 (1)
  • EC:2.1.1.43 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA setd1ba-001 (1) 5953
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM setd1ba No data available
    MARKER RELATIONSHIPS
    setd1baContained in: [BAC] CH211-265M20 (1) (order this), DKEY-237O15 (1) (order this)
    setd1baEncodes: [EST] IMAGE:7156157 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001045134 (1) 8154bp
    Genomic GenBank:BX005309 (1) 179240bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4I9T6 (1) 1847aa
    Sequence Clusters UniGene:80156 (1)
    Sequence Information (all 29)
    OTHER setd1ba GENE PAGES
  • Alliance (1)
  • Gene:567970 (1)
  • VEGA:OTTDARG00000023719 (1)
  • Ensembl(GRCz10):ENSDARG00000060847 (1)
  • ORTHOLOGY for setd1ba (Chr: 10)
    CITATIONS (23)