Gene

pabpc1b

ID
ZDB-GENE-050308-1
Name
poly A binding protein, cytoplasmic 1 b
Symbol
pabpc1b Nomenclature History
Previous Names
None
Type
protein_coding_gene
Location
Chr: 19 Mapping Details/Browsers
Description
Predicted to have RNA binding activity. Predicted to be involved in regulation of RNA metabolic process. Predicted to localize to nucleus and ribonucleoprotein complex. Is expressed in several structures, including alar plate midbrain region; nervous system; notochord; pronephric duct; and yolk syncytial layer. Orthologous to human PABPC1 (poly(A) binding protein cytoplasmic 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
8 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With pabpc1b Human Ortholog
No data available
Associated With pabpc1b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000504 RNA recognition motif domain
Domain IPR002004 Polyadenylate-binding protein/Hyperplastic disc protein
Domain IPR003954 RNA recognition motif domain, eukaryote
Domain IPR045305 PABP, RNA recognition motif 2
Family IPR006515 Polyadenylate binding protein, human types 1, 2, 3, 4
Homologous_superfamily IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Homologous_superfamily IPR035979 RNA-binding domain superfamily
Homologous_superfamily IPR036053 PABC (PABP) domain
Domain Details Per Protein
Protein Length Nucleotide-binding alpha-beta plait domain superfamily PABC (PABP) domain PABP, RNA recognition motif 2 Polyadenylate binding protein, human types 1, 2, 3, 4 Polyadenylate-binding protein/Hyperplastic disc protein RNA-binding domain superfamily RNA recognition motif domain RNA recognition motif domain, eukaryote
UniProtKB:I3ITD9 142
UniProtKB:B8JLJ5 207
UniProtKB:Q6P3L1 634
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations