ZFIN ID: ZDB-GENE-050306-8
Gene Name: protein phosphatase, Mg2+/Mn2+ dependent, 1K
Gene Symbol: ppm1k
Sequence Ontology ID : SO:0000704

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Previous Names: im:6912645, pp2cm (1), zgc:113207

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(Including Attributions)
Location: Chr: 1 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have protein serine/threonine phosphatase activity; involved in several processes, including animal organ development, digestive tract development, and negative regulation of apoptotic  ...
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:6912645]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa39688 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: 5 figures from Lu et al., 2007
    Observed in:
    DISEASE ASSOCIATED WITH ppm1k HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    maple syrup urine disease ?Maple syrup urine disease, mild variant 615135
    DISEASE ASSOCIATED WITH ppm1k VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process brain development (more)
    Molecular Function protein serine/threonine phosphatase activity (more)
    GO Terms (all 13)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000222 (1)
  • InterPro:IPR001932 (1)
  • InterPro:IPR015655 (1)
  • InterPro:IPR036457 (1)
  • PROSITE:PS01032 (1)
  • PROSITE:PS51746 (1)
  • Pfam:PF00481 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA ppm1k-003 (1) 2372
    ppm1k-005 (1) 827
    aberrant processed transcript ppm1k-201 (1) 908
    mRNA ppm1k-202 (1) 2996
     Withdrawn Transcriptsextinct
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM ppm1k No data available
    MARKER RELATIONSHIPS
    ppm1kContained in: [BAC] CH73-190M4 (1) (order this), DKEY-192D9 (1) (order this)
    ppm1kEncodes: [EST] IMAGE:6912645 (1) (order this)
    [cDNA] MGC:113207 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001013307 (1) 2020bp
    Genomic GenBank:CR788312 (1) 177966bp
    Select Tool
    Polypeptide UniProtKB:F1R0V7 (1) 372aa
    Sequence Clusters UniGene:38105 (1)
    Sequence Information (all 21)
    OTHER ppm1k GENE PAGES
  • Alliance (1)
  • Gene:503713 (1)
  • VEGA:OTTDARG00000021923 (1)
  • Ensembl(GRCz11):ENSDARG00000010655 (2)
  • ORTHOLOGY for ppm1k (Chr: 1)
    CITATIONS (18)