ZFIN ID: ZDB-GENE-050227-20
Gene Name: coiled-coil domain containing 115
Gene Symbol: ccdc115    Nomenclature History

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Previous Name: zgc:113121

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 23 Mapping Details/Browsers
Description: Predicted to have unfolded protein binding activity. Predicted to be involved in cellular iron ion homeostasis. Predicted to localize to extrinsic component of endoplasmic reticulum membrane and vacuolar proton-transporting V-type ATPase complex. Human ortholog(s) of this gene implicated in congenital disorder of glycosylation type IIo. Orthologous to human CCDC115 (coiled-coil domain containing 115).
Genome Resources: Alliance (1),  Gene:503608 (1),  Ensembl(GRCz11):ENSDARG00000033533 (1)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:6905212]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH ccdc115 HUMAN ORTHOLOG
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
congenital disorder of glycosylation type IIo Alliance Congenital disorder of glycosylation, type IIo 616828
DISEASE ASSOCIATED WITH ccdc115 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process cellular iron ion homeostasis (more)
Cellular Component endoplasmic reticulum (more)
Molecular Function unfolded protein binding (more)
GO Terms (all 11)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA ccdc115-201 (1)    Ensembl 911
ncRNA ccdc115-002 (1)    Ensembl 553
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM ccdc115 No data available
MARKER RELATIONSHIPS
ccdc115 Contained in: [BAC] DKEY-109J17 (1) (order this)
ccdc115 Encodes: [EST] IMAGE:6905212 (1)
[cDNA] MGC:113121 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_001013295 (1) 940 nt
Genomic GenBank:CR388168 (1) 158190 nt
Select Tool
Polypeptide UniProtKB:F1QSB2 (1) 206 aa
Sequence Information (all 13)
ORTHOLOGY for ccdc115 ( Chr: 23 )
CITATIONS (21)