ZFIN is now using GRCz12tu for Genomic Data
Gene
supt7l
- ID
- ZDB-GENE-050227-17
- Name
- SPT7 like, STAGA complex subunit gamma
- Symbol
- supt7l Nomenclature History
- Previous Names
-
- im:6909690
- zgc:113136
- Type
- protein_coding_gene
- Location
- Chr: 17 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable transcription coactivator activity. Predicted to be involved in positive regulation of DNA-templated transcription. Predicted to be located in nucleus. Predicted to be part of SAGA complex. Human ortholog(s) of this gene implicated in cataract. Orthologous to human SUPT7L (SPT7 like, STAGA complex subunit gamma).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:6909690 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| Fischer-Zirnsak progeroid syndrome | 621130 |
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Bromodomain associated domain | Histone-fold | STAGA complex 65 subunit gamma/SAGA complex subunit Spt7 |
|---|---|---|---|---|---|
| UniProtKB:Q5EAS4 | InterPro | 414 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
supt7l-201
(1)
|
Ensembl | 1,453 nt | ||
| mRNA |
supt7l-202
(1)
|
Ensembl | 1,277 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers