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ZIRC
ZFIN ID: ZDB-GENE-050220-6
Gene Name: zgc:113436
Gene Symbol: zgc:113436
Sequence Ontology ID : SO:0001217

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(Including Attributions)
Location: Chr: 5 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have nucleic acid binding activity. Predicted to be involved in DNA integration. Orthologous to human GIN1 (gypsy retrotransposon integrase 1).

Nomenclature Note: This gene is characterized by full length cDNAs isolated as part of the Zebrafish Gene Collection (ZGC). When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix `zgc:' indicates that this gene is represented by cDNAs generated by the ZGC project.

GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa33614 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH zgc:113436 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH zgc:113436 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process DNA integration (more)
    Molecular Function nucleic acid binding (more)
    GO Terms (all 2)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA zgc:113436-002 (1) 571
    mRNA zgc:113436-201 (1) 2170
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM zgc:113436 No data available
    MARKER RELATIONSHIPS
    zgc:113436 Contained in: [BAC] DKEY-21K4 (1) (order this)
    zgc:113436 Encodes: [cDNA] MGC:113436 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001012492 (1) 1440 bp
    Genomic GenBank:AL929297 (1) 104074 bp
    Select Tool
    Polypeptide UniProtKB:A3KGZ3 (1) 433 aa
    Sequence Clusters UniGene:22101 (1)
    Sequence Information (all 18)
    ORTHOLOGY for zgc:113436 ( Chr: 5 )
    CITATIONS (11)