ZFIN ID: ZDB-GENE-050208-586
Gene Name: neurocan b
Gene Symbol: ncanb    Nomenclature History

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Previous Names: ncan, cspg3 (1), si:ch211-123b7.1

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 22 Mapping Details/Browsers
Description: Predicted to have calcium ion binding activity and hyaluronic acid binding activity. Predicted to be involved in central nervous system development and skeletal system development. Predicted to localize to extracellular matrix. Orthologous to human NCAN (neurocan).
Genome Resources: Alliance (1),  Ensembl(GRCz11):ENSDARG00000005783 (2)
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
a221 Complex Unknown Unknown CRISPR
sa18086 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    CRISPR1-ncanb 1
    CRISPR2-ncanb 1
    CRISPR3-ncanb 1
    CRISPR4-ncanb 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH ncanb HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH ncanb VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cell adhesion (more)
    Cellular Component extracellular matrix (more)
    Molecular Function calcium ion binding (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA ncanb-202 (1)    Ensembl 929
    ncanb-203 (1)    Ensembl 961
    Browsers: EnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM ncanb No data available
    MARKER RELATIONSHIPS
    ncanb Contained in: [BAC] CH211-123B7 (1), DKEY-19F23 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    Genomic GenBank:BX908731 (1) 180390 nt
    Select Tool
    Polypeptide UniProtKB:F1QEZ8 (1) 1254 aa
    Sequence Information (all 8)
    ORTHOLOGY for ncanb ( Chr: 22 )
    CITATIONS (18)