ZFIN ID: ZDB-GENE-050208-585
Gene Name: protein tyrosine phosphatase receptor type C
Gene Symbol: ptprc
Sequence Ontology ID : SO:0000704

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Previous Names: cd45 (1), sb:eu845, si:dkeyp-47c5.1

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(Including Attributions)
Location: Chr: 22 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have protein tyrosine phosphatase activity; predicted to be involved in protein dephosphorylation; predicted to localize to the integral component of membrane; orthologous to human PTPRC  ...
GENE EXPRESSION
All Expression Data: 9 figures from 6 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2005 [eu845]
Wild-type Stages, Structures: Pharyngula:Prim-5 (24.0h-30.0h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
 
Curated Microarray Expression: GEO (1)
PHENOTYPE No data available
DISEASE ASSOCIATED WITH ptprc HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
severe combined immunodeficiency, autosomal recessive, T cell-negative, B cell-positive, Nk cell-positive Severe combined immunodeficiency, T cell-negative, B-cell/natural killer-cell positive 608971
{Hepatitis C virus, susceptibility to} 609532
DISEASE ASSOCIATED WITH ptprc VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process dephosphorylation (more)
Cellular Component integral component of membrane (more)
Molecular Function hydrolase activity (more)
GO Terms (all 8)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000242 (1)
  • InterPro:IPR000387 (1)
  • InterPro:IPR003595 (1)
  • InterPro:IPR003961 (1)
  • InterPro:IPR013783 (1)
  • InterPro:IPR016130 (1)
  • InterPro:IPR029021 (1)
  • InterPro:IPR036116 (1)
  • PROSITE:PS00383 (1)
  • PROSITE:PS50055 (1)
  • PROSITE:PS50056 (1)
  • Pfam:PF00102 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ptprc-202 (1) 3226
    ptprc-203 (1) 771
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM ptprc
    MARKER RELATIONSHIPS
    ptprcContained in: [BAC] DKEYP-47C5 (1)
    ptprcEncodes: [EST] eu845 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_021469594 (1)
    Genomic GenBank:BX469928 (1) 141594bp
    Select Tool
    Polypeptide UniProtKB:F1R8P8 (1) 1130aa
    Sequence Clusters UniGene:125091 (1)
    Sequence Information (all 25)
    OTHER ptprc GENE PAGES
  • Alliance (1)
  • Gene:559154 (1)
  • VEGA:OTTDARG00000010303 (1)
  • Ensembl(GRCz11):ENSDARG00000071437 (2)
  • ORTHOLOGY for ptprc (Chr: 22)
    CITATIONS (35)