ZFIN Gene: pdgfb

ZFIN ID: ZDB-GENE-050208-525

ZFIN ID: ZDB-GENE-050208-525

Gene Name:	platelet-derived growth factor beta polypeptide
Gene Symbol:	pdgfb
Previous Names:	si:ch211-79m20.1, si:dkey-261d11.1
Location:	Chr: 22 Details
Nomenclature History

GENE EXPRESSION
All Expression Data:	4 figures from 4 publications
Wild-type Stages, Structures:	Segmentation:20-25 somites (19.0h-22.0h) to Adult (90d-730d, breeding adult)
	axial vasculature , head blood vessel , heart , intersegmental vessel (all 7)

MUTANTS AND TARGETED KNOCKDOWNS

Knockdown reagents:

MO1-pdgfb (1), MO2-pdgfb (1)

PHENOTYPE

Phenotype of Human Orthologue	OMIM Phenotype ID
Basal ganglia calcification, idiopathic, 5	615483
Dermatofibrosarcoma protuberans	607907
Meningioma, SIS-related	607174

GENE ONTOLOGY

Ontology	GO Term
Biological Process	regulation of DNA replication (more)
Cellular Component	extracellular space (more)
Molecular Function	platelet-derived growth factor receptor binding (more)

GO Terms (all 14)

PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available

TRANSCRIPTS
Type	Name	Length (bp)	Analysis
mRNA	pdgfb-001 (1)	1195	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT Vega

GENE PRODUCT DESCRIPTION No description available

ANTIBODIES No data available

CONSTRUCTS WITH SEQUENCES FROM pdgfb

Tg(UAS:dnpdgfrb-YFP)

SEGMENT (CLONE AND PROBE) RELATIONSHIPS

pdgfb Contained in:

[BAC] CH211-79M20 (1) (order this), DKEY-261D11 (1)

SEQUENCE INFORMATION

Type	Accession #	Length (bp/aa)	Analysis
RNA	RefSeq:XM_688601 (1)	2693 bp	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT Vega
Genomic	GenBank:AL929274 (1)	169459 bp	Select Tool MegaBLAST Ensembl
Polypeptide	RefSeq:XP_693693 (1)	462 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast Vega Protein Blast
Sequence Clusters	UniGene:82403 (1)

OTHER pdgfb GENE PAGES

Gene:565324 (1)

VEGA:OTTDARG00000017343 (1)

Ensembl(Zv9):ENSDARG00000086778 (1)

ORTHOLOGY

CITATIONS (12)