ZFIN ID: ZDB-GENE-050208-502
Gene Name: tudor domain containing 5
Gene Symbol: tdrd5
Sequence Ontology ID : SO:0000704

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Previous Name: si:dkey-171o17.7

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(Including Attributions)
Location: Chr: 22 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to be involved in DNA methylation involved in gamete generation, P granule organization, and spermatid development; predicted to localize to the chromatoid body and pi-body; orthologous to  ...
GENE EXPRESSION
All Expression Data: Fig. S6 from Strasser et al., 2008
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la022214Tg Transgenic Insertion Unknown Unknown DNA
sa37486 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH tdrd5 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH tdrd5 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process DNA methylation involved in gamete generation (more)
    Cellular Component chromatoid body (more)
    GO Terms (all 10)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR002999 (1)
  • InterPro:IPR025605 (1)
  • InterPro:IPR035437 (1)
  • InterPro:IPR037982 (1)
  • PROSITE:PS50304 (1)
  • PROSITE:PS51644 (1)
  • Pfam:PF00567 (1)
  • Pfam:PF12872 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA tdrd5-001 (1) 3268
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM tdrd5 No data available
    MARKER RELATIONSHIPS
    tdrd5Contained in: [BAC] DKEY-171O17 (1) (order this)
    tdrd5Encodes: [cDNA] MGC:162394 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001044850 (1) 3268bp
    Genomic GenBank:CR381682 (1) 106921bp
    Select Tool
    Polypeptide UniProtKB:A0A2R8QF80 (1) 947aa
    Sequence Clusters UniGene:81476 (1)
    Sequence Information (all 17)
    OTHER tdrd5 GENE PAGES
  • Alliance (1)
  • Gene:557999 (1)
  • VEGA:OTTDARG00000010137 (1)
  • Ensembl(GRCz11):ENSDARG00000071450 (2)
  • ORTHOLOGY for tdrd5 (Chr: 22)
    CITATIONS (26)