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ZIRC
ZFIN ID: ZDB-GENE-050208-358
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Gene Name: phosphatidylinositol-4-phosphate 5-kinase, type I, gamma a
Gene Symbol: pip5k1ca
Sequence Ontology ID : SO:0001217

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Previous Names: pip5k1c (1), si:ch211-197g15.13 (1), si:dkey-29i9.1 (1)

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(Including Attributions)
Location: Chr: 22 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have ATP binding activity and phosphatidylinositol phosphate kinase activity. Predicted to be involved in phosphatidylinositol metabolic process and phosphorylation. Human ortholog(s) of  ...
GENE EXPRESSION
All Expression Data: Fig. 2 from Xu et al., 2018
Wild-type Stages, Structures: Pharyngula:Prim-5 (24.0h-30.0h) to Pharyngula:Prim-5 (24.0h-30.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa3152 Point Mutation Unknown Premature Stop ENU
sa24142 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa45766 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
    • Targeting reagents:
    PHENOTYPE
    Data: 4 figures from Xu et al., 2018
    Observed in:
    DISEASE ASSOCIATED WITH pip5k1ca HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Lethal congenital contractural syndrome 3 611369
    DISEASE ASSOCIATED WITH pip5k1ca VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process phosphatidylinositol metabolic process (more)
    Molecular Function ATP binding (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR002498 (1)
  • InterPro:IPR023610 (1)
  • InterPro:IPR027483 (1)
  • InterPro:IPR027484 (1)
  • PROSITE:PS51455 (1)
  • Pfam:PF01504 (1)
    • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA pip5k1ca-201 (1) 2558
    Select Tool
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM pip5k1ca No data available
    MARKER RELATIONSHIPS
    pip5k1ca Contained in: [BAC] CH73-243B8 (1) (order this), CH211-197G15 (1) (order this), DKEY-29I9 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_002666250 (1) 4830 bp
    Select Tool
    Genomic GenBank:BX649327 (1) 206348 bp Blast at MegaBLAST
    Polypeptide UniProtKB:E7F4U5 (1) 682 aa
    Select Tool
    Sequence Clusters UniGene:120155 (1)
    Sequence Information (all 29)
    OTHER pip5k1ca GENE PAGES
  • Alliance (1)
  • Gene:798876 (1)
  • VEGA:OTTDARG00000031591 (1)
  • Ensembl(GRCz11):ENSDARG00000076001 (2)
    • ORTHOLOGY for pip5k1ca ( Chr: 22 )
    CITATIONS (17)