ZFIN ID: ZDB-GENE-050208-114
Gene Name: vitrin
Gene Symbol: vit    Nomenclature History

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Previous Names: ch1073-291c23.1, im:7140198 (1), si:ch1073-291c23.1

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 13 Mapping Details/Browsers
Description: Involved in visual perception. Predicted to localize to collagen-containing extracellular matrix and extracellular space.
Genome Resources: Alliance (1),  Gene:497398 (1),  Ensembl(GRCz11):ENSDARG00000063631 (1)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7140198]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa1300 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa10205 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa16108 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa16980 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa22187 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-vit N/A 1
    DISEASE ASSOCIATED WITH vit HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH vit VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process visual perception (more)
    Cellular Component collagen-containing extracellular matrix (more)
    Molecular Function molecular_function (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA vit-201 (1)    Ensembl 2697
    Browsers: NCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM vit No data available
    MARKER RELATIONSHIPS
    vit Contained in: [Fosmid] CH1073-291C23 (1)
    vit Encodes: [EST] IMAGE:7140198 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:XM_009307031 (1)
    Genomic GenBank:FO904836 (1) 35777 nt
    Select Tool
    Polypeptide UniProtKB:F1Q7N1 (1) 762 aa
    Sequence Information (all 28)
    ORTHOLOGY for vit ( Chr: 13 )
    CITATIONS (19)