ZFIN ID: ZDB-GENE-050114-2
Gene Name: LIM homeobox transcription factor 1, beta b
Gene Symbol: lmx1bb
Sequence Ontology ID : SO:0000704

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Previous Names: lmx1b.1, lmx1b (1), alo (1)

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(Including Attributions)
Location: Chr: 8 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 23 figures from 12 publications
Wild-type Stages, Structures: Gastrula:Bud (10.0h-10.33h) to Adult (90d-730d, breeding adult)
 
PHENOTYPE
Data: 13 figures from 4 publications
Observed in:
DISEASE ASSOCIATED WITH lmx1bb HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
nail-patella syndrome Nail-patella syndrome 161200
GENE ONTOLOGY
Ontology GO Term
Biological Process closure of optic fissure (more)
Cellular Component nucleus (more)
Molecular Function DNA binding (more)
GO Terms (all 17)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001356 (1)
  • InterPro:IPR001781 (1)
  • InterPro:IPR009057 (1)
  • InterPro:IPR017970 (1)
  • PROSITE:PS00027 (1)
  • PROSITE:PS00478 (1)
  • PROSITE:PS50023 (1)
  • PROSITE:PS50071 (1)
  • Pfam:PF00046 (1)
  • Pfam:PF00412 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA lmx1bb-001 (1) 1952
    ncRNA lmx1bb-002 (1) 697
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM lmx1bb
    MARKER RELATIONSHIPS
    lmx1bbContained in: [BAC] CH211-81G2 (1) (order this), CH211-101A21 (1) (order this), DKEY-17A16 (1) (order this)
    lmx1bbEncodes: [cDNA] MGC:194366 (1) (order this), MGC:194387 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001025167 (1) 1952bp
    Genomic GenBank:CR376762 (1) 183602bp
    Select Tool
    Polypeptide UniProtKB:Q4L1M6 (1) 375aa
    Sequence Clusters UniGene:108678 (1)
    Sequence Information (all 26)
    OTHER lmx1bb GENE PAGES
  • Alliance (1)
  • Gene:554360 (1)
  • VEGA:OTTDARG00000020391 (1)
  • Ensembl(GRCz10):ENSDARG00000068365 (1)
  • ORTHOLOGY for lmx1bb (Chr: 8)
    CITATIONS (43)