ZFIN ID: ZDB-GENE-050105-6
Gene Name: transient receptor potential cation channel, subfamily A, member 1a
Gene Symbol: trpa1a
Sequence Ontology ID : SO:0000704

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Name: trpa1 (1)

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 2 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 3 figures from 2 publications
Wild-type Stages, Structures: Larval:Protruding-mouth (72.0h-96.0h, 3.5mm) to Adult (90d-730d, breeding adult)
 
PHENOTYPE No data available
DISEASE ASSOCIATED WITH trpa1a HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
?Episodic pain syndrome, familial, 1 615040
?Episodic pain syndrome, familial, 1 615040
DISEASE ASSOCIATED WITH trpa1a VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process detection of chemical stimulus (more)
Cellular Component integral component of membrane (more)
Molecular Function calcium-release channel activity (more)
GO Terms (all 13)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR002110 (1)
  • InterPro:IPR005821 (1)
  • InterPro:IPR020683 (1)
  • InterPro:IPR030288 (1)
  • InterPro:IPR036770 (1)
  • PROSITE:PS50088 (1)
  • PROSITE:PS50297 (1)
  • Pfam:PF00023 (1)
  • Pfam:PF00520 (1)
  • Pfam:PF12796 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA trpa1a-001 (1) 4245
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM trpa1a No data available
    MARKER RELATIONSHIPS
    trpa1aContained in: [BAC] DKEY-265A7 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001007065 (1) 4231bp
    Genomic GenBank:BX510360 (1) 213323bp Blast at MegaBLAST
    Polypeptide UniProtKB:F1R7I3 (1) 1126aa
    Sequence Clusters UniGene:135281 (1)
    Sequence Information (all 14)
    OTHER trpa1a GENE PAGES
  • Alliance (1)
  • Gene:474351 (1)
  • VEGA:OTTDARG00000018408 (1)
  • Ensembl(GRCz11):ENSDARG00000016699 (2)
  • ORTHOLOGY for trpa1a (Chr: 2)
    CITATIONS (31)