ZFIN ID: ZDB-GENE-050105-4
Gene Name: solute carrier family 17 (vesicular glutamate transporter), member 6a
Gene Symbol: slc17a6a
Sequence Ontology ID : SO:0000704

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Previous Names: slc17a6l, VGLUT2.2 (2), vglut2b (2), wu:fj12c01

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(Including Attributions)
Location: Chr: 25 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 31 figures from 19 publications
Wild-type Stages, Structures: Pharyngula:Prim-5 (24.0h-30.0h) to Adult (90d-730d, breeding adult)
  brain, brain glutamatergic neuron, caudal periventricular hypothalamus, caudal zone of dorsal telencephalon (all 21) expand
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa1530 Point Mutation Unknown Premature Stop ENU
sa9610 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa16943 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • European Zebrafish Resource Center (EZRC) (order this)
  • sa38140 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa44350 Point Mutation Unknown Premature Stop ENU
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH slc17a6a HUMAN ORTHOLOGNo data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process ion transport (more)
    Cellular Component cell junction (more)
    Molecular Function symporter activity (more)
    GO Terms (all 13)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR011701 (1)
  • InterPro:IPR020846 (1)
  • InterPro:IPR036259 (1)
  • PROSITE:PS50850 (1)
  • Pfam:PF07690 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA slc17a6a-001 (1) 2608
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM slc17a6a No data available
    MARKER RELATIONSHIPS
    slc17a6aContained in: [BAC] DKEY-261M9 (1) (order this)
    slc17a6aEncodes: [EST] fj12c01 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001009982 (1) 2608bp
    Genomic GenBank:CR762436 (1) 177448bp
    Select Tool
    Polypeptide UniProtKB:F1QPP6 (1) 587aa
    Sequence Clusters UniGene:80782 (1)
    Sequence Information (all 13)
    OTHER slc17a6a GENE PAGES
  • Alliance (1)
  • Gene:494492 (1)
  • VEGA:OTTDARG00000035523 (1)
  • Ensembl(GRCz10):ENSDARG00000001127 (1)
  • ORTHOLOGY for slc17a6a (Chr: 25)
    CITATIONS (57)