Gene

srsf6b

ID
ZDB-GENE-041219-1
Name
serine and arginine rich splicing factor 6b
Symbol
srsf6b Nomenclature History
Previous Names
  • sfrs6
  • sfrs6b
  • wu:faa54g02
  • wu:fc17h09
  • zgc:103497
Type
protein_coding_gene
Location
Chr: 11 Mapping Details/Browsers
Description
Predicted to have mRNA binding activity. Predicted to be involved in mRNA splicing, via spliceosome and regulation of alternative mRNA splicing, via spliceosome. Predicted to localize to nuclear speck. Human ortholog(s) of this gene implicated in proliferative diabetic retinopathy and spermatogenic failure 3. Orthologous to human SRSF6 (serine and arginine rich splicing factor 6).
Genome Resources
Note
None
Expression
All Expression Data
3 figures from 2 publications
Cross-Species Comparison
High Throughput Data
No data available
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With srsf6b Human Ortholog
No data available
Associated With srsf6b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000504 RNA recognition motif domain
Domain IPR034511 SRSF6, RNA recognition motif 1
Homologous_superfamily IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Homologous_superfamily IPR035979 RNA-binding domain superfamily
Domain Details Per Protein
Protein Length Nucleotide-binding alpha-beta plait domain superfamily RNA-binding domain superfamily RNA recognition motif domain SRSF6, RNA recognition motif 1
UniProtKB:Q5M9N3 355
UniProtKB:A8DZG2 355
UniProtKB:A0A0R4ISU1 95
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Gene Tree
Ensembl
Citations