ZFIN ID: ZDB-GENE-041210-245
Gene Name: nucleoporin 107
Gene Symbol: nup107
Sequence Ontology ID : SO:0000704

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: si:dkey-27k7.3 (1), zgc:152723

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 4 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 3 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7152148]
  1 figure (1 image) from Thisse et al., 2004 [IMAGE:7150867]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
  head, intestine, unspecified, whole organism
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la024507Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa840 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa9555 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa11499 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa12652 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa12659 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • European Zebrafish Resource Center (EZRC) (order this)
  • sa31398 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa33466 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • European Zebrafish Resource Center (EZRC) (order this)
  • sa40296 Point Mutation Unknown Premature Stop ENU
    tsu068Gt Transgenic Insertion Unknown Unknown DNA
  • China Zebrafish Resource Center (CZRC) (order this)
  • Targeting reagents: MO1-nup107 (1), MO2-nup107 (1)
    PHENOTYPE
    Data: 10 figures from 3 publications
    Observed in: apoptotic process, brain, chondroblast nuclear pore, eye (all 33) expand
    DISEASE ASSOCIATED WITH nup107 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Nephrotic syndrome, type 11 616730
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process mRNA export from nucleus (more)
    Cellular Component nuclear pore (more)
    Molecular Function nucleocytoplasmic transporter activity (more)
    GO Terms (all 10)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR007252 (1)
  • Pfam:PF04121 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA nup107-001 (1) 2953
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM nup107 No data available
    MARKER RELATIONSHIPS
    nup107Contained in: [BAC] DKEY-27K7 (1) (order this)
    nup107Encodes: [EST] IMAGE:7150867 (1) (order this), IMAGE:7152148 (1) (order this)
    [cDNA] MGC:152723 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001030167 (1) 2953bp
    Genomic GenBank:BX897665 (1) 129995bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4IJT3 (1) 920aa
    Sequence Clusters UniGene:48434 (1)
    Sequence Information (all 17)
    OTHER nup107 GENE PAGES
  • Alliance (1)
  • Gene:562350 (1)
  • VEGA:OTTDARG00000009311 (1)
  • Ensembl(GRCz10):ENSDARG00000016010 (1)
  • ORTHOLOGY for nup107 (Chr: 4)
    CITATIONS (29)