ZFIN ID: ZDB-GENE-041210-196
Gene Name: Scm like with four mbt domains 2
Gene Symbol: sfmbt2    Nomenclature History

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Previous Name: si:dkey-235i4.4

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 4 Mapping Details/Browsers
Description: Predicted to have histone binding activity and transcription corepressor activity. Predicted to be involved in regulation of transcription, DNA-templated. Predicted to localize to the nucleus. Orthologous to human SFMBT2 (Scm like with four mbt domains 2).
Genome Resources: Alliance (1),  Ensembl(GRCz11):ENSDARG00000045519 (2)
GENE EXPRESSION No data available
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa38442 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-sfmbt2 N/A 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH sfmbt2 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH sfmbt2 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of transcription, DNA-templated (more)
    Cellular Component nucleus (more)
    Molecular Function histone binding (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Domain IPR001660 Sterile alpha motif domain
    Repeat IPR004092 Mbt repeat
    Homologous_superfamily IPR013761 Sterile alpha motif/pointed domain superfamily
    Domain IPR021987 SLED domain
    Domain IPR037604 Scm-like with four MBT domains protein 1/2, SAM domain
    Homologous_superfamily IPR038348 SLED domain superfamily
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA sfmbt2-201 (1)    Ensembl 3141
    Browsers: NCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM sfmbt2 No data available
    MARKER RELATIONSHIPS
    sfmbt2 Contained in: [BAC] CH211-239O15 (1), DKEY-235I4 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    Genomic GenBank:AL954652 (1) 152900 bp
    Select Tool
    Polypeptide UniProtKB:A0A286Y9G2 (1) 864 aa
    Sequence Information (all 6)
    ORTHOLOGY for sfmbt2 ( Chr: 4 )
    CITATIONS (15)