ZFIN ID: ZDB-GENE-041210-167
Gene Name: plakophilin 2
Gene Symbol: pkp2
Sequence Ontology ID : SO:0000704

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Previous Name: si:ch211-11c20.1

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(Including Attributions)
Location: Chr: 4 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 3 figures from 2 publications
Wild-type Stages, Structures: Cleavage:64-cell (2.0h-2.25h) to Adult (90d-730d, breeding adult)
  epidermis, heart, neuroepithelial cell, whole organism
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Targeting reagents: MO1-pkp2 (1)
PHENOTYPE
Data: 4 figures from Moriarty et al., 2012
Observed in: atrium, blood, cardiac ventricle, heart cell-cell junction (all 10) expand
DISEASE ASSOCIATED WITH pkp2 HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
arrhythmogenic right ventricular dysplasia 9 Arrhythmogenic right ventricular dysplasia 9 609040
GENE ONTOLOGY
Ontology GO Term
Biological Process desmosome organization (more)
GO Terms (all 4)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000225 (1)
  • InterPro:IPR011989 (1)
  • InterPro:IPR016024 (1)
  • InterPro:IPR028435 (1)
  • PROSITE:PS50176 (1)
  • Pfam:PF00514 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA pkp2-001 (1) 1740
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM pkp2 No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    pkp2Contained in: [BAC] CH211-11C20 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001113433 (1) 2824bp
    Genomic GenBank:BX001012 (1) 158481bp
    Select Tool
    Polypeptide UniProtKB:B0BF33 (1) 815aa
    Sequence Clusters UniGene:83512 (1)
    Sequence Information (all 9)
    OTHER pkp2 GENE PAGES
  • Gene:568060 (1)
  • VEGA:OTTDARG00000008109 (1)
  • Ensembl(GRCz10):ENSDARG00000023026 (1)
  • ORTHOLOGY for pkp2 (Chr: 4)
    CITATIONS (12)