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ZIRC
ZFIN ID: ZDB-GENE-041122-2
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Gene Name: activation-induced cytidine deaminase
Gene Symbol: aicda
Sequence Ontology ID : SO:0000704

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Previous Name: aid (1)

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(Including Attributions)
Location: Chr: 16 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Exhibits cytidine deaminase activity; involved in somatic cell DNA recombination; predicted to localize to the cytoplasm and nucleus; orthologous to human AICDA (activation induced cytidine  ...
GENE EXPRESSION
All Expression Data: 4 figures from Rai et al., 2010
Wild-type Stages, Structures: Hatching:Long-pec (48.0h-60.0h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Targeting reagents:
PHENOTYPE No data available
DISEASE ASSOCIATED WITH aicda HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
immunodeficiency with hyper-IgM type 2 Immunodeficiency with hyper-IgM, type 2 605258
DISEASE ASSOCIATED WITH aicda VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process somatic cell DNA recombination (more)
Cellular Component nucleus (more)
Molecular Function cytidine deaminase activity (more)
GO Terms (all 6)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR002125 (1)
  • InterPro:IPR016192 (1)
  • InterPro:IPR016193 (1)
    		•
  • PROSITE:PS00903 (1)
  • PROSITE:PS51747 (1)
    		•
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA aicda-201 (1) 869
    Select Tool
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM aicda No data available
    MARKER RELATIONSHIPS
    aicdaContained in: [BAC] DKEY-38O19 (1) (order this)
    [Fosmid] CH1073-443O9 (1) (order this)
    aicdaEncodes: [cDNA] MGC:193818 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001008403 (1) 889bp
    Select Tool
    Genomic GenBank:CR848818 (1) 208738bp Blast at MegaBLAST
    Polypeptide UniProtKB:B3DGZ0 (1) 210aa
    Select Tool
    Sequence Clusters UniGene:92887 (1)
    Sequence Information (all 13)
    OTHER aicda GENE PAGES
  • Alliance (1)
  • Gene:493784 (1)
  • VEGA:OTTDARG00000020878 (1)
  • Ensembl(GRCz11):ENSDARG00000015734 (1)
    • ORTHOLOGY for aicda (Chr: 16)
    CITATIONS (28)