ZFIN is now using GRCz12tu for Genomic Data
Gene
zmynd8
- ID
- ZDB-GENE-041119-1
- Name
- zinc finger, MYND-type containing 8
- Symbol
- zmynd8 Nomenclature History
- Previous Names
-
- prkcbp1
- Type
- protein_coding_gene
- Location
- Chr: 11 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable transcription corepressor activity. Predicted to act upstream of or within phosphorylation and regulation of DNA-templated transcription. Predicted to be active in cytoplasm and nucleus. Orthologous to human ZMYND8 (zinc finger MYND-type containing 8).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR019786 | Zinc finger, PHD-type, conserved site |
| Domain | IPR000313 | PWWP domain |
| Domain | IPR001487 | Bromodomain |
| Domain | IPR001965 | Zinc finger, PHD-type |
| Domain | IPR002893 | Zinc finger, MYND-type |
| Domain | IPR019787 | Zinc finger, PHD-finger |
| Domain | IPR037967 | ZMYND8, Bromo domain |
| Domain | IPR044075 | PRKCBP1, PHD finger |
| Family | IPR021931 | MYND-type zinc finger-containing chromatin reader ZMYND8 |
| Homologous_superfamily | IPR011011 | Zinc finger, FYVE/PHD-type |
| Homologous_superfamily | IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| Homologous_superfamily | IPR036427 | Bromodomain-like superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Bromodomain | Bromodomain-like superfamily | MYND-type zinc finger-containing chromatin reader ZMYND8 | PRKCBP1, PHD finger | PWWP domain | Zinc finger, FYVE/PHD-type | Zinc finger, MYND-type | Zinc finger, PHD-finger | Zinc finger, PHD-type | Zinc finger, PHD-type, conserved site | Zinc finger, RING/FYVE/PHD-type | ZMYND8, Bromo domain |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A0R4ISB9 | InterPro | 1201 | ||||||||||||
| UniProtKB:A0A2R8Q412 | InterPro | 1182 | ||||||||||||
| UniProtKB:A0A8M9Q7N0 | InterPro | 1175 | ||||||||||||
| UniProtKB:A0AB32U2N5 | InterPro | 1205 | ||||||||||||
| UniProtKB:A0AB32U3P1 | InterPro | 1179 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
zmynd8-202
(1)
|
Ensembl | 5,373 nt | ||
| mRNA |
zmynd8-203
(1)
|
Ensembl | 6,025 nt | ||
| mRNA |
zmynd8-204
(1)
|
Ensembl | 5,902 nt | ||
| ncRNA |
zmynd8-002
(1)
|
Ensembl | 1,029 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers