ZFIN ID: ZDB-GENE-041116-1
Gene Name: vitronectin b
Gene Symbol: vtnb    Nomenclature History

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 21 Mapping Details/Browsers
Description: Predicted to have polysaccharide binding activity and scavenger receptor activity. Predicted to be involved in immune response. Is expressed in hypothalamus; liver; liver primordium; and yolk syncytial layer. Human ortholog(s) of this gene implicated in Churg-Strauss syndrome; granulomatosis with polyangiitis; and thrombosis. Orthologous to human VTN (vitronectin).
Genome Resources: Alliance (1),  Gene:403026 (1),  Ensembl(GRCz11):ENSDARG00000053831 (2)
GENE EXPRESSION
All Expression Data: 14 figures from 4 publications
Directly Submitted Expression Data: 7 figures (6 images) from Thisse et al., 2004 [IMAGE:6907751]
Wild-type Stages, Structures: Segmentation:20-25 somites (19.0h-22.0h) to Adult (90d-730d, breeding adult)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
PHENOTYPE No data available
DISEASE ASSOCIATED WITH vtnb HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH vtnb VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process immune response (more)
Molecular Function polysaccharide binding (more)
GO Terms (all 3)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA vtnb-201 (1)    Ensembl 1785
ncRNA vtnb-002 (1)    Ensembl 870
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM vtnb No data available
MARKER RELATIONSHIPS
vtnb Contained in: [BAC] CH73-26C18 (1), CH211-167L17 (1)
vtnb Encodes: [EST] IMAGE:6907751 (1), fb26d07 (1)
vtnb Has Artifact: [cDNA] MGC:111943 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_001139461 (1)
Genomic GenBank:BX005137 (1) 156370 nt
Select Tool
Polypeptide UniProtKB:A7E2Q3 (1) 469 aa
Sequence Information (all 16)
ORTHOLOGY for vtnb ( Chr: 21 )
CITATIONS (26)