Gene

clic5a

ID
ZDB-GENE-041114-84
Name
chloride intracellular channel 5a
Symbol
clic5a Nomenclature History
Previous Names
  • zgc:101827
Type
protein_coding_gene
Location
Chr: 17 Mapping Details/Browsers
Description
Predicted to have chloride channel activity. Predicted to be involved in chloride transport and regulation of ion transmembrane transport. Predicted to localize to nucleus. Human ortholog(s) of this gene implicated in autosomal recessive nonsyndromic deafness 103. Orthologous to human CLIC5 (chloride intracellular channel 5).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With clic5a Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
?Deafness, autosomal recessive 103 616042
Associated With clic5a Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR004045 Glutathione S-transferase, N-terminal
Domain IPR010987 Glutathione S-transferase, C-terminal-like
Domain IPR042069 CLIC5, C-terminal GST domain
Family IPR002946 Intracellular chloride channel
Family IPR040079 Glutathione transferase family
Homologous_superfamily IPR036249 Thioredoxin-like superfamily
Homologous_superfamily IPR036282 Glutathione S-transferase, C-terminal domain superfamily
Domain Details Per Protein
Protein Length CLIC5, C-terminal GST domain Glutathione S-transferase, C-terminal domain superfamily Glutathione S-transferase, C-terminal-like Glutathione S-transferase, N-terminal Glutathione transferase family Intracellular chloride channel Thioredoxin-like superfamily
UniProtKB:Q5U3P5 246
Transcripts
Genome Browsers
Type Name Annotation Method Length (nt) Analysis
mRNA clic5a-201 (1) Havana 1906 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations